Original URL: http://info.bio.cmu.edu/Courses/03438/Nsome/1AOI.htm

Nucleosome Structure

  Show the:
  Proteins, only.
  DNA, only.
  Whole complex.

  Rotate:
  X 90°   X -90°
  Y 90°   Y -90°

  Distances:
  Protein core
  ( in Å units)
  Whole complex
  (diam in Å units)

  Reset

The Nucleosome Core Particle.
Eukaryotic chromatin is organized in a structural hierarchy. The smallest unit is the nucleosome, a complex between ~150 bp of DNA and two copies each of four histones. The DNA strands are colored green and brown. The histone coloring is: H3, blue; H4, light green; H2A, yellow; and H2B, red. Note the "histone-fold" in all four proteins. This is a structural motif comprised of three a-helices connected by two loops (a1-L1-a2-L2-a3). See the close-ups below for how they combine in the heterodimers to form crescent-shaped DNA-binding units.
(cf. Fig. 1a of Luger, et al.)
  Close-up view of the H3-H4 histone-fold pair.
  Highlight:Leu 65 (spacefill). Arg and Lys residues (blue).
    (cf. Fig. 2a of Luger, et al.)
  Close-up view of the H2A-H2B histone-fold pair.
  Highlight: Arg and Lys residues (blue).
    (cf. Fig. 2b of Luger, et al.)

Viewing tips:
Use the buttons to the right of the image to show only portions of the structure; then use the Chime menu to display or color the molecule. The rotate buttons act on the entire structure. Remove the distance monitors with a second click.

TOP

Back to PBC99 Home Page

The image displayed on this page requires the Chemscape Chime plug-in.
A description of its use at this site can be found at the Chime Features page.
Coordinates from 1AOI.pdb. Luger, K. et al. (1997) "Crystal structure of the nucleosome core particle at 2.8 Å resolution". Nature 389 251.
The Header information from the 1AOI PDB file.