ENTRY EC 3.4.21.5
NAME Thrombin
Fibrinogenase
CLASS Hydrolases
Acting on peptide bonds (peptidases)
Serine endopeptidases
REACTION Selective cleavage of Arg+Gly bonds in fibrinogen to form fibrin
and release fibrinopeptides A and B
SUBSTRATE Peptide
Fibrinogen
Amide
Ester
H2O
PRODUCT Amino acid(Arg-)
Fibrin
Alcohol
Fibrinopeptide A
Fibrinopeptide B
INHIBITOR Benzamidine
D-Phe-Pro-Arg-CH2Cl
Nalpha-(2-naphthyl-sulfonyl-glycyl)-D-para-amidinopheyl-
$alanylpiperadine
(2R,4R)-4-Methyl-1[Nalpha-[(3-methyl-1,2,3,4-tetrahydro-
$8-quinolinyl)sulfonyl]-L-arginyl)]-2-
$piperadinecarboxylic acid
COMMENT Formed from prothrombin. More selective than trypsin and plasmin.
A homologue of chymotrypsin. Formerly EC 3.4.4.13.
Inhibitors: J.Biol.Chem.266,20085-20093(1991)
DISEASE MIM: 176930 Coagulation factor II (thrombin); Hypoprothrombinemia
(3); Dysprothrombinemia (3)
MOTIF PS: PS00011 x(12)-E-x(3)-E-x-C-x(6)-[DEN]-x-[LIVMFY]-x(9)-[FYW]
PS: PS00021 [FY]-C-R-N-P-[DNR]
PS: PS00134 [LIVM]-[ST]-A-[STAG]-H-C
PS: PS00135 [DNSTAGC]-[GSTAPIMVQH]-x(2)-G-[DE]-S-G-[GS]-[SAPHV]-
[LIVMFYWH]-[LIVMFYSTANQH]
GENES HSA: F2
STRUCTURES PDB: 1IHS 1HXF 1HXE 1HUT 1HRT 4HTC 1HDT 1HAP 1HAO 1HAI
1HAH 1HAG 1FPH 1HBT 1FPC 1ETS 1ETR 1DWE 1DWD 1DWC
1DWB 1DIT 1BMN 1BMM 1BBR 1AHT 1ABJ 1ABI 1IHT 1LHC
1LHD 1LHE 1LHF 1LHG 1MKW 1MKX 1NRN 1NRO 1NRP 1NRQ
1NRR 1NRS 1PPB 1TBQ 1TBR 1THR 1THS 1TMB 1TMT 1TMU
1TOM 1UCY 1UMA 1VIT 2HGT 2HPP 2HPQ 2SPT 3HAT 1HGT
1ETT 3HTC
DBLINKS University of Geneva ENZYME DATA BANK: 3.4.21.5
WIT (What Is There) Metabolic Reconstruction: 3.4.21.5
SCOP (Structural Classificaion of Proteins): 3.4.21.5
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