Original URL: http://www.genome.ad.jp/kegg/kegg2.html
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| KEGG - Table of Contents |
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| Category | Pathway Map Ortholog Table | Search & Compute | DBGET Search |
|---|---|---|---|
| Pathway | Metabolic pathways | Search objects in pathway maps
Color objects in pathway maps Search or color genes in ortholog tables Search similar sequences in pathway maps Search similar sequences in ortholog tables Generate possible reaction pathways | PATHWAY
GENES |
| Regulatory pathways |
| Category | Molecular Catalog | DBGET Search |
|---|---|---|
| Enzyme | EC number classification
Enzyme classification by PIR superfamilies Enzyme classification by SCOP 3D-folds Enzyme classification by PROSITE motifs | LIGAND |
| Compound | Compound classification | |
| Element | Periodic table |
| Category | Genome Map | Search & Analyze |
|---|---|---|
| Genome | Genome map browsers (Java)
Genome map comparison (Java) | Search gene positions in genome map
Color genes in genome map Identify gene clusters in two genomes Search homologous gene clusters |
| Category | Species | Com- pleted | Gene Catalogs | DBGET Search | ||
|---|---|---|---|---|---|---|
| Proteobacteria | Escherichia coli | 1997 | KEGG Operons | Wisconsin Operons | GENES | Eco |
| Haemophilus influenzae | 1995 | KEGG | TIGR | Hin | ||
| Helicobacter pylori 26695 | 1997 | KEGG | TIGR | Hpy | ||
| Helicobacter pylori J99 | 1999 | KEGG | Hpj | |||
| Rickettsia prowazekii | 1998 | KEGG | Uppsala | Rpr | ||
| Salmonella typhimurium | Sty | |||||
| Gram-positive bacteria | Bacillus subtilis | 1997 | KEGG | BSORF | Bsu | |
| Mycoplasma genitalium | 1995 | KEGG | TIGR | Mge | ||
| Mycoplasma pneumoniae | 1996 | KEGG | ZMBH | Mpn | ||
| Mycobacterium tuberculosis | 1998 | KEGG | Sanger | Mtu | ||
| Staphylococcus aureus | Sau | |||||
| Chlamydia | Chlamydia trachomatis | 1998 | KEGG | Berkeley | Ctr | |
| Chlamydia pneumoniae | 1999 | KEGG | Berkeley | Cpn | ||
| Spirochete | Borrelia burgdorferi | 1997 | KEGG | TIGR | Bbu | |
| Treponema pallidum | 1998 | KEGG | TIGR | Tpa | ||
| Cyanobacteria | Synechocystis sp. | 1996 | KEGG | Kazusa | Syn | |
| Oxygen-reducing bacteria | Aquifex aeolicus | 1998 | KEGG | Diversa | Aae | |
| Archaea | Methanococcus jannaschii | 1996 | KEGG | TIGR | Mja | |
| Methanobacterium thermoautotrophicum | 1997 | KEGG | GTC | Mth | ||
| Archaeoglobus fulgidus | 1997 | KEGG | TIGR | Afu | ||
| Pyrococcus horikoshii | 1998 | KEGG | NITE | Pho | ||
| Fungi | Saccharomyces cerevisiae | 1997 | KEGG | SGD MIPS | Sce | |
| Schizosaccharomyces pombe | Spo | |||||
| Candida albicans | Cal | |||||
| Cellular slime mold | Dictyostelium discoideum | Ddi | ||||
| Higher plants | Arabidopsis thaliana | AtDB | Ath | |||
| Oryza sativa | Osa | |||||
| Zea mays | Zma | |||||
| Nematode | Caenorhabditis elegans | 1998 | KEGG | ACeDB | Cel | |
| Insect | Drosophila melanogaster | KEGG | FlyBase | Dme | ||
| Rodent | Mus musculus | KEGG | MGD | Mmu | ||
| Human | Homo sapiens | KEGG Map | GDB Map | Hsa | ||
| Human disease genes | KEGG Map | OMIM Map | OMIM | |||
| Server | Search GENES | Search GENOME |
|---|---|---|
| KEGG | Search GENES or its subset by FASTA
Search GENES subset by BLAST | Search GENOME or its subset by FASTA
Search GENOME subset by BLAST |
| GenomeNet | Search GENES by FASTA
Search GENES by BLASTP Search GENES by BLASTX |
KEGG Release 10.0 (April 1999) plus daily updates
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